Greener Journal of Agricultural Sciences

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Kouadjo et al

Greener Journal of Agricultural Sciences

Vol. 8(10), pp. 304-309, 2018

ISSN: 2276-7770

Copyright ©2018, the copyright of this article is retained by the author(s)

DOI Link: http://doi.org/10.15580/GJAS.2018.10.110718155

http://gjournals.org/GJAS

 

 

 


 

Detection of Pepper Yellow Vein Mali Virus associated with pepper in Yamoussoukro, Côte d’Ivoire

 

 

 

Kouadjo, Zaka Ghislaine Claude (1) ; Lassina, Fondio (2) ; N'gbesso, Mako François De Paul (2) ; Koffi, Ghislain (1)

 

 

 

(1)  Laboratoire Central de Biotechnologie/Unité de Pathologie Moléculaire/ Centre National de Recherche Agronomique

 

(2)  Programme culture maraichers et Protéagineuse-Centre National de Recherche Agronomique

 

  

 

ARTICLE INFO

ABSTRACT

 

Article No.: 110718155

Type: Research

DOI: 10.15580/GJAS.2018.10.110718155

 

 

A field survey was conducted in Yamoussoukro Côte d’Ivoire in order to collect pepper leaves harboring the Pepper Yellow vein disease (PYVD). Five local farmers pepper fields located around the lakes of Yamoussoukro were surveyed. Ten samples were PCR- amplified using universal degenerated core-Cp primers and sequenced. Blast analyses showed that the PepYVV-Mali was responsible of the PYVD symptoms within two samples. Phylogenetic analyses showed that the two identified PepYVV-Mali formed a new clade different from the previous PepYVV-Mali isolated in Burkina Faso and Côte d’Ivoire. The pairwise analysis confirmed this discrepancy by a sequence similarity of 95-96%.

 

Submitted: 07/11/2018

Accepted:  10/11/2018

Published: 15/11/2018

 

*Corresponding Author

KOUADJO Claude

E-mail: claudghis@ gmail. com

 

Keywords:

PepYVV-Mali-Detection- Yamoussoukro-Côte d’Ivoire

 

 


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REFERENCES

 

Adama E, Michel G. 2004. La filière des produits horticoles en Côte d’Ivoire. Diagnostic, objectifs et perspectives, p. 167.

 

ANADER. 2004. Rapport de présentation de l’enquête sur le développement de l’horticulture urbaine et périurbaine de Yamoussoukro, p. 21.

 

Bernard Firmin TANO, Kouabenan ABO, Ardjouma DEMBELE et Lassina FONDIO (2011). Systèmes de production et pratiques à risque en agriculture urbaine : cas du maraîchage dans la ville de Yamoussoukro en Côte d’Ivoire. Int. J. Biol. Chem. Sci. 5(6): 2317-2329.

 

Bolou Bi Bolou Antoine, Abo Kouabenan, Doumbouya Mohamed, Kouamé Koffi Gaston, Kassi Koffi Fernand, Tuo Seydou, Nahoua Koné, Kouassi N’dri Pacôme and Koné Daouda. (2016). Analysis of Sclerotinia Expression Due to Sclerotium rolfsii Fungus in Market Gardening Crops in the Different Agroecological Zones of Côte d’Ivoire. J Ag Ecology Research International 6(3): 1-12.

 

David Satterthwaite, Gordon McGranahan, and Cecilia Tacoli (2010). Urbanization and its implications for food and farming. Philos Trans R Soc Lond B Biol Sci.; 365(1554): 2809–2820.

 

Doyle JJ, Doyle JL. Isolation of plant DNA from fresh tissue. Focus (Madison). (1990). 12:13–5.

 

Edgar RC. MUSCLE (2004): multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792–7.

 

FAO 2004: Fruit and Vegetables for Health. Report of a Joint FAO/WHO Workshop, 1–3 September 2004, Kobe, Japan.

 

Fidèle Tiendrébéogo, V. S. Edgar Traoré, Nicolas Bamo, Alfred S. Traoré, Gnissa Konaté and Oumar Traoré. (2008). Characterization of pepper yellow vein mali in Capsium sp. In Burkina Faso. Plant pathol J 7 (2): 155-161.

 

Gerard Grubben, Wijnand Klaver, Rémi Nono-Womdim, Arij Everaarts, Lassina Fondio, Jan Arie Nugteren and Marina Corrado (2014) Vegetables to Combat the Hidden Hunger in Africa. The world of horticulture. Chronica Horticulturae, Volume 54, issue 1.

 

Brown J.K., Idris A.M., Torres-Jerez I., Banks G.K., Wyatt S.D. (2001). The core region of the coat protein gene is highly useful for establishing the provisional identification and classification of begomoviruses. Archives of Virology August 2001, Volume 146, Issue 8, pp 1581–1598.

 

Séka K., Ouattara A., Assiri K.P., Kra K.D., Hoareau M., Lefeuvre P., Atta Diallo H. and Lett J.M. (2017). First report of Pepper yellow vein Mali virus associated with pepper yellow vein disease in Cote d’Ivoire. New Disease Reports 35, 11.

 

Lefeuvre, P., Lett, J.M., Varsani, A. and Martin, D.P. (2009) Widely conserved recombination patterns amongst single stranded DNA viruses. J. Virol. 83, 2697–2707.

 

Muhire BM, Varsani A, Martin DP (2014) SDT: A virus classification tool based on pairwise sequence alignment and identity calculation. Plos One 9:1–8.

 

Padidam, M., Beachy, R. N. & Fauquet, C. M. (1995). Classification and identification of geminiviruses using sequence comparisons. Jgv 76, 249±263

 

Padidam, M., Sawyer, S. and Fauquet, C.M. (1999) Possible emergence of new geminiviruses by frequent recombination. Virology, 265, 218–225.

 

Pierre Lefeuvre, Gordon W. Harkins, Jean-Michel Lett, Rob W. Briddon, Mark W. Chase, Benoit Moury  and Darren P. Martin (2011). Evolutionary Time-Scale of the Begomoviruses: Evidence from Integrated Sequences in the Nicotiana Genome. PLoS One. 6(5).

 

Seka Koutoua, Ouattara Alassane, Assiri K.P., Kra K.D., Hoareau Murielle, Lefeuvre Pierre, Atta Diallo H., Lett Jean-Michel (2016). First reports of Cotton leaf curl Gezira virus and Okra yellow crinkle virus associated with okra leaf curl disease in Côte d'Ivoire. New Disease Reports, 34 (8), 1 p.

 

Siobain Duffy and Edward C. Holmes (2009). Validation of high rates of nucleotide substitution in geminiviruses: phylogenetic evidence from East African cassava mosaic viruses. J Gen Virol Jun; 90 (Pt 6): 1539–1547.

 

Walter N Leke, Djana B Mignouna, Judith K Brown and Anders Kvarnheden. (2015). Begomovirus disease complex: emerging threat to vegetable production systems of West and Central Africa. Agriculture & Food Security 4:1.


 

Cite this Article: Kouadjo, Z.G.C.; Lassina, F.; N'gbesso, M.F.D.; Koffi, G. (2018). Detection of Pepper Yellow Vein Mali Virus associated with pepper in Yamoussoukro, Côte d’Ivoire. Greener Journal of Agricultural Sciences, 8(10), 304-309, http://doi.org/10.15580/GJAS.2018.10.110718155 

 

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